API reference

1. PyRanges objects are the main data structure in pyranges1

2. The pyranges1 module offer file readers and other utilities

3. Extensions submodules provide additional domain-specific functionalities

4. RangeFrame is the parent class of PyRanges, supporting operations on simple intervals

Contents:

• PyRanges objects
  • PyRanges
• The pyranges1 module
  • concat()
  • count_overlaps()
  • from_string()
  • random()
  • read_bam()
  • read_bed()
  • read_bigwig()
  • read_gff()
  • read_gff3()
  • read_gtf()
  • tile_genome()
  • pyranges1.options
  • pyranges1.example_data
  • pyranges1.assistant
• Extensions submodules
  • Orfs: Open Reading Frames
  • Seqs: sequences
  • Stats: statistics
• RangeFrame
  • RangeFrame